Skip to contents

Adds an infection_type_src column indicating whether the infection type was present in the raw data ("observed"), derived from dates ("inferred"), or could not be determined ("unknown").

Usage

prep_flag_hai_inferred(
  data,
  infection_type_col = "infection_type",
  infection_type_method_col = "infection_type_method"
)

Arguments

data

Data frame.

infection_type_col

Character. Raw/observed infection type column. Default "infection_type".

infection_type_method_col

Character. Method column added by prep_derive_hai_cai(). Default "infection_type_method".

Value

Data frame with infection_type_src column added.