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Fixed-effect convergence broken out by source of variation

Source: R/plot_beta_family_diagnostics.R
plot_probit_beta_family_diagnostics.Rd

Splits the fixed-effect ("beta") parameter group by which covariate family each coefficient belongs to (Intercept / Hospital / Age / Sex / Specimen / Ward-ICU / Other, by covariate-name pattern), so a reviewer can see directly whether e.g. hospital contrasts specifically are destabilising the fit, rather than only a single aggregate Rhat/ESS for all of "beta".

Usage

plot_probit_beta_family_diagnostics(fit, title_base = "")

Arguments

fit

List returned by fit_bayesian_multivariate_probit().

title_base

Character. Prefixed to plot titles.

Value

Named list with table (a formatted summary page) and bar (a percent-Rhat-above-1.01-by-family bar chart), or NULL if fixed-effect parameter diagnostics are unavailable.