Maps various susceptibility/resistance representations to standard
"S" (Susceptible), "R" (Resistant), "I" (Intermediate) values.
Usage
standardize_susceptibility(data, col = "antibiotic_value")
Arguments
- data
Data frame containing susceptibility column
- col
Character. Name of susceptibility column. Default "antibiotic_value".
Value
Data frame with standardized susceptibility values and added column
antibiotic_value_std